ELP Microarray Database
| Experiment Description |
Microarrays
|
Samples (links to ELP Microarray Database) |
ArrayExpress Data Set |
Related Publications |
| SA response in seven Arabidopsis accessions at three time points post-treatment. |
126
|
SA-treated and control samples (3 biological replicates) | Kliebenstein et al. 2006(a)
van Leeuwen et al. 2007 |
|
| JA response in the Bayreuth-0 and Shahdara accessions at three time points post-treatment. |
12
|
control samples (2 biological replicates) | West et al. 2006 | |
|
12
|
JA-treated samples (2 biological replicates) |
coming soon
|
JA manuscript in preparation | |
| SA response in the Bayreuth-0 and Shahdara accessions at three time points post-treatment. |
12
|
control samples (2 biological replicates) | West et al. 2006 | |
|
12
|
SA-treated samples (2 biological replicates) |
coming soon
|
SA manuscript in preparation | |
|
eQTL mapping with 211 Bay-0 x Sha RILs (SA treated and controls) at one time point post-treatment. 4 separate analyses were performed with this dataset: | ||||
|
A: marker development with 148 RILs (silwet controls only)
B: network eQTL mapping in 148 RILs with a priori defined gene networks **The 148 RILs are a subset of the 211 RIL set** |
8
+ 296 |
Bay-0 and Sha controls (4 biological replicates)
148 RILs, controls only (2 biological replicates) |
West et al. 2006
Kliebenstein et al. 2006(b) |
|
| C: eQTL studies with full set of 211 RILs (silwet controls only) |
16
+ 422 |
West et al. 2007 | ||
| D: eQTL studies with full set of 211 RILs (SA-treatment) |
16
+ 422 |
Bay-0 and Sha, SA-treated (8 biological replicates)
211 RILs, SA-treated (2 biological replicates) |
coming soon
|
eQTL (SA-treatment) manuscript in preparation |
