Expression Level Polymorphism Project



Home Home Laboratories and People Publications Data and Tools ELP Microarray Database NSF Award Collaborations Web links ELP Intranet (restricted)

Data and Tools



SFPscan. SFP detection and genotyping in a RIL population using microarray data.

Bay-0 x Sha RIL Lines. List of the lines from O. Loudet used for our eQTL analysis, cross-referenced to the ABRC stock numbers from TAIR.

Bay-0 × Sha SFP Haplotype Map (211 RILs). High-density haplotype map of the Arabidopsis Bay-0 × Sha RIL population (211 RILs), using single feature polymorphism (SFP) markers.

Bay-0 × Sha SFP Haplotype Map (148 RILs). High-density haplotype map of the Arabidopsis Bay-0 × Sha RIL population (148 RILs), using single feature polymorphism (SFP) markers.

Bay-0 × Sha GEM Haplotype Map (148 RILs). Haplotype map of the Arabidopsis Bay-0 × Sha RIL population (148 RILs), using gene expression markers (GEMs).

ELP finder. Find expression level polymorphisms between 7 Arabidopsis accessions.

Probeset-Gene Converter. Convert the Affymetrix ATH1 GeneChip probeset ID into the Arabidopsis gene code, and vice versa.

Gene Annotator. Retrieve the Arabidopsis TIGR 5.0 annotation or the Affymetrix ATH1 GeneChip probeset annotation (title, description, GO annotation, cDNA support, CDS, protein, transcript).




Contact information.

last modified on September 19, 2007